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    React Full Stack Developer - Dubai, United Arab Emirates - Dice

    Dice
    Dice Dubai, United Arab Emirates

    23 hours ago

    Default job background
    Description

    Description

    The Laboratory of Computational Biology (Stein Aerts lab) at VIB-KU Leuven is seeking a postdoc to join our efforts in deciphering the genomic regulatory code underlying cellular identity, with a focus on the

    • You will develop new AI strategies to learn the genome syntax using large-scale single-cell multi-ome atlases as training data
    • You will unravel the diversity of neuronal cell types in the brain of various species (octopus, birds, mammals) through machine-learning & comparative genomics
    • You will work very closely together with our wet-lab for data generation and experimental validations
    • You will use your AI models to generate synthetic enhancers with new functions, and to functionally interpret non-coding genome variation (health and disease).

    Publications

    Recent scientific contributions from the lab include new bioinformatics methods for the analysis of single-cell gene regulatory networks, namely SCENIC and cisTopic; new experimental assays for single-cell ATAC-seq (HyDrop) and for massively parallel enhancer reporter assays; deep learning implementations for enhancer modelling (DeepMEL & DeepFlyBrain); and the generation of multiple single-cell atlases of the fly brain and the fly cell

    Check out recent publications:

    • Janssens, Aibar & Taskiran, Nature 2022
    • Li & Janssens, Science 2022
    • Davie & Janssens, Cell 2018
    • Aibar et , Nat Methods 2017
    • Bravo et , Nat Methods 2019

    For all our publications, see

    Profile

    • You obtained a PhD degree in Artificial Intelligence, Bioinformatics, Computer Science, Physics, Engineering, Bio-engineering, or
    • Proficient in Python programming
    • Experience with machine learning is a plus (, Tensorflow/Keras/PyTorch)
    • Experience with explainable AI (, SHAP) is a plus
    • Experience with high performance computing, software containers
    • Experience with single-cell genomics is a plus, but not absolutely essential
    • Ability to work independently and in a

    We offer:

    • Access to state-of-the-art compute & GPU infrastructure
    • A stimulating international research environment
    • You can be a driving force in a new EOS consortium across three Belgian Universities
    • Competitive salary and benefits
    • Fully funded postdoc position for 3 years, but encouraged to apply for an international fellowship (, EMBO, Marie Curie, FWO, HFSP, ).
    • Starting date: as soon as possible

    How to apply?

    Please complete the online application procedure and include a detailed CV, two reference letters, and a motivation

    For more information:

    • Discover our Center and visit the website or look around during a virtual tour
    • Follow us on social media: Facebook and Twitter
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